Mississippi LLC Taxes

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How an Mississippi LLC is taxed: federal pass-through treatment, self-employment tax, Mississippi income and entity taxes, and the payments to plan for.

An Mississippi LLC is taxed at three levels: federal income tax on the profits, Mississippi state rules, and payroll or sales taxes that depend on what the business does. Mississippi taxes personal income, so LLC owners report their share of profit on a Mississippi return in addition to the federal one. Mississippi also has an entity-level tax to plan for: Franchise tax for corps.

Federal tax treatment

By default the IRS treats a single-member LLC as a disregarded entity, so profit is reported on Schedule C of the owner's personal return. A multi-member LLC is taxed as a partnership and files Form 1065, with each member receiving a Schedule K-1. Either can elect to be taxed as an S corporation (Form 2553) or a C corporation (Form 8832). See the IRS page on LLCs.

Self-employment tax

Members who work in the business generally pay self-employment tax of 15.3% on net earnings: 12.4% for Social Security up to the annual wage base set by the SSA, and 2.9% for Medicare with no cap, plus an additional 0.9% Medicare tax at higher incomes. An S corporation election can reduce this for profitable businesses, but it requires running payroll and paying yourself a reasonable salary. Our LLC vs S-Corp comparison walks through the trade-off.

Mississippi state taxes

TaxMississippi treatment
State personal income taxApplies to owners' share of LLC profit
Franchise or entity-level taxFranchise tax for corps
Annual report feeNo fee

Sales tax, payroll tax, and local business taxes sit on top of these. If you sell taxable goods or services, register with the Mississippi tax agency for a sales tax permit. If you hire, you will register for state unemployment insurance and withholding.

Estimated tax payments

LLC owners usually have no employer withholding, so they pay federal estimated tax each quarter, and Mississippi estimated tax as well. Missing estimates can trigger underpayment penalties, so many owners set aside a percentage of every payment they receive.

Mississippi specific notes

Mississippi LLCs must file an annual report online at no charge, due April 15 each year.

Mississippi LLC at a glance

ItemDetail
Filing officeMississippi Secretary of State
LLC filing fee$50
Annual reportNo fee, filed every year
Franchise or entity taxFranchise tax for corps
State personal income taxYes
Corporation filing fee (for comparison)$50

Tax rules and thresholds change, and this page is general information. Confirm details with the Mississippi tax agency and a licensed CPA before you file.

Frequently asked questions

Does a Mississippi LLC pay state income tax?
Mississippi taxes personal income, so LLC owners report their share of profit on a Mississippi return. The LLC itself is not usually taxed unless it elects corporate treatment.
Is there a franchise tax for Mississippi LLCs?
Franchise tax for corps.
How is a Mississippi LLC taxed federally?
By default as a pass-through: Schedule C for single-member LLCs and Form 1065 for multi-member LLCs. It may elect S corporation or C corporation treatment.
Do LLC owners pay self-employment tax?
Generally yes, at 15.3% on net earnings up to the Social Security wage base and 2.9% above it, unless the LLC elects S corporation status and owners take a reasonable salary.

Sources & further reading

Disclaimer: Legal information, not legal advice. For advice about your specific situation, consult a licensed attorney or CPA in your state. See our full disclaimer.